The pip3 install for nheri-simcenter failed for me:
Sanjays-MBP2020:~ sg$ pip3 install nheri-simcenter
Collecting nheri-simcenter
Downloading nheri_simcenter-0.9.1-py3-none-any.whl (4.3 kB)
Collecting tqdm
Downloading tqdm-4.56.0-py2.py3-none-any.whl (72 kB)
|████████████████████████████████| 72 kB 4.2 MB/s
Collecting pandas<=1.1.5,>=1.1.0
Downloading pandas-1.1.5-cp39-cp39-macosx_10_9_x86_64.whl (10.3 MB)
|████████████████████████████████| 10.3 MB 20.7 MB/s
Collecting jpype1
Downloading JPype1-1.2.1-cp39-cp39-macosx_10_9_x86_64.whl (379 kB)
|████████████████████████████████| 379 kB 80.5 MB/s
Collecting sklearn
Downloading sklearn-0.0.tar.gz (1.1 kB)
Collecting xlrd<=1.2.0
Downloading xlrd-1.2.0-py2.py3-none-any.whl (103 kB)
|████████████████████████████████| 103 kB 75.7 MB/s
Collecting tables
Downloading tables-3.6.1.tar.gz (4.6 MB)
|████████████████████████████████| 4.6 MB 83.6 MB/s
ERROR: Command errored out with exit status 1:
command: /usr/local/opt/python@3.9/bin/python3.9 -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/9d/rzw8lm7100923j8xf9bllgpc0000gn/T/pip-install-ssk3fkux/tables/setup.py'"'"'; __file__='"'"'/private/var/folders/9d/rzw8lm7100923j8xf9bllgpc0000gn/T/pip-install-ssk3fkux/tables/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base /private/var/folders/9d/rzw8lm7100923j8xf9bllgpc0000gn/T/pip-pip-egg-info-epxvhxqs
cwd: /private/var/folders/9d/rzw8lm7100923j8xf9bllgpc0000gn/T/pip-install-ssk3fkux/tables/
Complete output (10 lines):
/var/folders/9d/rzw8lm7100923j8xf9bllgpc0000gn/T/H5close9tul_kdb.c:2:5: error: implicit declaration of function 'H5close' is invalid in C99 [-Werror,-Wimplicit-function-declaration]
H5close();
^
1 error generated.
* Using Python 3.9.0 (default, Nov 21 2020, 14:01:50)
* USE_PKGCONFIG: True
.. ERROR:: Could not find a local HDF5 installation.
You may need to explicitly state where your local HDF5 headers and
library can be found by setting the ``HDF5_DIR`` environment
variable or by using the ``--hdf5`` command-line option.
----------------------------------------
ERROR: Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.
